DNAPlotter: circular and linear interactive genome visualization

نویسندگان

  • Tim J. Carver
  • Nick Thomson
  • Alan J. Bleasby
  • Matthew Berriman
  • Julian Parkhill
چکیده

UNLABELLED DNAPlotter is an interactive Java application for generating circular and linear representations of genomes. Making use of the Artemis libraries to provide a user-friendly method of loading in sequence files (EMBL, GenBank, GFF) as well as data from relational databases, it filters features of interest to display on separate user-definable tracks. It can be used to produce publication quality images for papers or web pages. AVAILABILITY DNAPlotter is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute web sites: http://www.sanger.ac.uk/Software/Artemis/circular/

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عنوان ژورنال:
  • Bioinformatics

دوره 25  شماره 

صفحات  -

تاریخ انتشار 2009